# instrument-data-to-allotrope

> Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flatte…

Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flattened 2D CSV. Use this skill when scientists need to standardize instrument data for LIMS systems, data lakes, or downstream analysis. Supports auto-detection of instrument types. Outputs include full ASM JSON, flattened CSV for easy import, and exportable Python code for data engineers. Common triggers include converting instrument files, standardizing lab data, preparing data for upload to LIMS/ELN systems, or generating parser code for production pipelines.

- Type: Skill
- Made by: anthropics
- Category: Data & analytics
- Formats: Skills
- Version: ea24b77
- Source: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope
- Page: https://pluginboard.ai/skills/instrument-data-to-allotrope

## Works with

- ChatGPT
- Claude
- Gemini
- GitHub Copilot
- Cursor
- Claude Code
- Codex
- Antigravity
- Gemini CLI
- Replit
- OpenClaw
- OpenCode
- Hermes Agent

## Install

### ChatGPT

In ChatGPT: Download the instrument-data-to-allotrope folder and zip it, then Plugins → Skills → Create → Upload from your computer. Business and Enterprise plans.

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Claude

In Claude (web or desktop): Download the instrument-data-to-allotrope folder and zip the folder itself, then upload it in Customize → Skills.

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Gemini

In Gemini: Download the instrument-data-to-allotrope folder, then at gemini.google.com click Customize → Skills → Create → Upload and pick the folder (or a .zip of it).

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### GitHub Copilot

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.copilot/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Cursor

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.cursor/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Claude Code

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.claude/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

Or all of Bio Research, in Claude Code:

```text
/plugin marketplace add anthropics/knowledge-work-plugins
/plugin install bio-research@knowledge-work-plugins
```

### Codex

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.agents/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Antigravity

In Antigravity: Copy the instrument-data-to-allotrope folder into ~/.gemini/config/skills (Antigravity app and IDE) or ~/.gemini/antigravity-cli/skills (Antigravity CLI).

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Gemini CLI

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.gemini/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Replit

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope .agents/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### OpenClaw

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.openclaw/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### OpenCode

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.config/opencode/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

### Hermes Agent

Run in your terminal:

```shell
npx -y degit anthropics/knowledge-work-plugins/bio-research/skills/instrument-data-to-allotrope ~/.hermes/skills/instrument-data-to-allotrope
```

View the folder on GitHub: https://github.com/anthropics/knowledge-work-plugins/tree/HEAD/bio-research/skills/instrument-data-to-allotrope

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From Pluginboard (https://pluginboard.ai).